The nationwide Slovak men’s knockout cup has been contested independently since 1993–94. The Slovak component competition of the Czechoslovak Cup through 1992–93 is not counted again as a title of the independent state.
| Season | Slovak Cup winner | Runner-up | Trophy |
|---|---|---|---|
| 2026/27 | - | - The 2026–27 Slovnaft Cup is in progress and no cup winner has been determined yet. | — |
| 2025/26 | MŠK Žilina | FC Košice Final: 3–1 |  |
| 2024/25 | FC Spartak Trnava | MFK Ružomberok Final: 1–0 | |
| 2023/24 | MFK Ružomberok | FC Spartak Trnava Final: 1–0 | |
| 2022/23 | FC Spartak Trnava | ŠK Slovan Bratislava Final: 3–1 after extra time | |
| 2021/22 | FC Spartak Trnava | ŠK Slovan Bratislava Final: 2–1 after extra time | |
| 2020/21 | ŠK Slovan Bratislava | MŠK Žilina Final: 2–1 after extra time | |
| 2019/20 | ŠK Slovan Bratislava | MFK Ružomberok Final: 1–0 | |
| 2018/19 | FC Spartak Trnava | MŠK Žilina Final: 3–3 after extra time; won 4–1 on penalties | |
| 2017/18 | ŠK Slovan Bratislava | MFK Ružomberok Final: 3–1 |  |
| 2016/17 | ŠK Slovan Bratislava | MFK Skalica Final: 3–0 | |
| 2015/16 | AS Trenčín | ŠK Slovan Bratislava Final: 3–1 | |
| 2014/15 | AS Trenčín | FK Senica Final: 2–2 after extra time; won 3–2 on penalties | |
| 2013/14 | MFK Košice | ŠK Slovan Bratislava Final: 2–1 | |
| 2012/13 | ŠK Slovan Bratislava | MŠK Žilina Final: 2–0 | |
| 2011/12 | MŠK Žilina | FK Senica Final: 3–2 after extra time | |
| 2010/11 Slovak Cup | ŠK Slovan Bratislava | MŠK Žilina Final: 3–3 after extra time; won 5–4 on penalties | |
| 2009/10 Slovak Cup | ŠK Slovan Bratislava | FC Spartak Trnava Final: 6–0 | |
| 2008/09 Slovak Cup | MFK Košice | Artmedia Petržalka Final: 3–1 | |
| 2007/08 Slovak Cup | Artmedia Petržalka | FC Spartak Trnava Final: 1–0 | |
| 2006/07 Slovak Cup | FC ViOn Zlaté Moravce | FC Senec Final: 4–0 | |
| 2005/06 Slovak Cup | MFK Ružomberok | FC Spartak Trnava Final: 0–0 after extra time; won 4–3 on penalties | |
| 2004/05 Slovak Cup | MFK Dukla Banská Bystrica | Artmedia Bratislava Final: 2–1 | |
| 2003/04 Slovak Cup | Artmedia Petržalka | FC Steel Trans Ličartovce Final: 2–0 |  |
| 2002/03 Slovak Cup | ŠK Matador Púchov | ŠK Slovan Bratislava Final: 2–1 after extra time | |
| 2001/02 Slovak Cup | FK VTJ Koba Senec | ŠK Matador Púchov Final: 1–1 after extra time; won 4–2 on penalties | |
| 2000/01 Slovak Cup | Inter Bratislava | MFK Ružomberok Final: 1–0 | |
| 1999/00 Slovak Cup | Inter Bratislava | 1. FC Košice Final: 1–1 after extra time; won 4–2 on penalties | |
| 1998/99 Slovak Cup | ŠK Slovan Bratislava | MFK Dukla Banská Bystrica Final: 3–0 | |
| 1997/98 Slovak Cup | FC Spartak Trnava | 1. FC Košice Final: 2–0 | |
| 1996/97 Slovak Cup | ŠK Slovan Bratislava | FC TATRAN Prešov Final: 1–0 after extra time | |
| 1995/96 Slovak Cup | FC Chemlon Humenné | FC Spartak Trnava Final: 2–1 | |
| 1994/95 Slovak Cup | Inter Bratislava | FK DAC 1904 Dunajská Streda Final: 1–1 after extra time; won 3–1 on penalties | |
| 1993/94 Slovak Cup | ŠK Slovan Bratislava | FC TATRAN Prešov Final: 2–1 after extra time | |
