The Kup Bosne i Hercegovine has been the joint national main cup since 1997–98. The earlier parallel NSBiH, Herzeg-Bosnia and Republika Srpska cups were regional competitions and do not belong to this title lineage. The 1999–2000 winner was decided in a three-club final group; the 2019–20 competition was abandoned without a winner.
| Season | Bosnia and Herzegovina Cup | Runner-up | Trophy |
|---|---|---|---|
| 2025/26 | Zrinjski Mostar | Velež Mostar Final: 2–1 aggregate |  |
| 2024/25 | FK Sarajevo | Široki Brijeg Final: 5–1 aggregate | |
| 2023/24 | Zrinjski Mostar | FK Borac Banja Luka Final: 2–0 aggregate | |
| 2022/23 | Zrinjski Mostar | Velež Mostar Final: 1–0 | |
| 2021/22 | Velež Mostar | FK Sarajevo Final: 0–0 a.e.t.; 4–3 pens | |
| 2020/21 | FK Sarajevo | FK Borac Banja Luka Final: 0–0 a.e.t.; 4–1 pens | |
| 2019/20 | Abandoned The competition was abandoned after the quarter-finals because of the COVID-19 pandemic; no winner was declared. | ||
| 2018/19 | FK Sarajevo | Široki Brijeg Final: 2–1 aggregate | |
| 2017/18 | Željezničar Sarajevo | FK Krupa na Vrbasu Final: 6–0 aggregate | |
| 2016/17 | Široki Brijeg | FK Sarajevo Final: 1–1 aggregate; 4–2 pens | — |
| 2015/16 | Radnik Bijeljina | Sloboda Tuzla Final: 4–1 aggregate | — |
| 2014/15 | Olimpik Sarajevo | Široki Brijeg Final: 2–2 aggregate; 5–4 pens | — |
| 2013/14 | FK Sarajevo | Čelik Zenica Final: 5–1 aggregate | — |
| 2012/13 | Široki Brijeg | Željezničar Sarajevo Final: 2–2 aggregate; 5–4 pens | — |
| 2011/12 | Željezničar Sarajevo | Široki Brijeg Final: 1–0 aggregate | — |
| 2010/11 | Željezničar Sarajevo | Čelik Zenica Final: 4–0 aggregate | — |
| 2009/10 | FK Borac Banja Luka | Željezničar Sarajevo Final: 3–3 aggregate; away goals | — |
| 2008/09 | FK Slavija | Sloboda Tuzla Final: 2–2 aggregate; 4–3 pens | — |
| 2007/08 | Zrinjski Mostar | Sloboda Tuzla Final: 3–3 aggregate; 4–1 pens | — |
| 2006/07 | Široki Brijeg | FK Slavija Final: 2–1 aggregate | — |
| 2005/06 | HNK Orašje | Široki Brijeg Final: 3–0 aggregate | — |
| 2004/05 | FK Sarajevo | Široki Brijeg Final: 2–1 aggregate | — |
| 2003/04 | Modriča Maxima | FK Borac Banja Luka Final: 1–1 a.e.t.; 4–2 pens | — |
| 2002/03 | Željezničar Sarajevo | FK Leotar Final: 2–0 aggregate | — |
| 2001/02 | FK Sarajevo | Željezničar Sarajevo Final: 2–1 | — |
| 2000/01 | Željezničar Sarajevo | FK Sarajevo Final: 3–2 | — |
| 1999/00 | Željezničar Sarajevo | Other final-round participants - Final: won a three-club final group | — |
| 1998/99 | Bosna Visoko | FK Sarajevo Final: 1–0 a.e.t. | — |
| 1997/98 | FK Sarajevo | HNK Orašje Final: 1–0 aggregate | — |
